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Crystal structure and functional characterization of SF216 from Shigella flexneri

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Shigella flexneri is a Gram‐negative anaerobic bacterium that causes highly infectious bacterial dysentery in humans. Here, we solved the crystal structure of SF216, a hypothetical protein from the S. flexneri… Click to show full abstract

Shigella flexneri is a Gram‐negative anaerobic bacterium that causes highly infectious bacterial dysentery in humans. Here, we solved the crystal structure of SF216, a hypothetical protein from the S. flexneri 5a strain M90T, at 1.7 Å resolution. The crystal structure of SF216 represents a homotrimer stabilized by intersubunit interactions and ion‐mediated electrostatic interactions. Each subunit consists of three β‐strands and five α‐helices with the β‐β‐β‐α‐α‐α‐α‐α topology. Based on the structural information, we also demonstrate that SF216 shows weak ribonuclease activity by a fluorescence quenching assay. Furthermore, we identify potential druggable pockets (putative hot spots) on the surface of the SF216 structure by computational mapping.

Keywords: crystal structure; structure functional; structure; shigella flexneri; sf216

Journal Title: FEBS Letters
Year Published: 2017

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