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Selection of RNA‐Cleaving TNA Enzymes for Cellular Mg2+ Imaging

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Catalytic DNA‐based fluorescent sensors have enabled cellular imaging of metal ions such as Mg2+. However, natural DNA is prone to nuclease‐mediated degradation. Here, we report the in vitro selection of threose… Click to show full abstract

Catalytic DNA‐based fluorescent sensors have enabled cellular imaging of metal ions such as Mg2+. However, natural DNA is prone to nuclease‐mediated degradation. Here, we report the in vitro selection of threose nucleic acid enzymes (TNAzymes) with RNA endonuclease activities. One such TNAzyme, T17–22, catalyzes a site‐specific RNA cleavage reaction with a kcat of 0.017 min−1 and KM of 675 nM. A fluorescent sensor based on T17–22 responds to an increasing concentration of Mg2+ with a limit of detection at 0.35 mM. This TNAzyme‐based sensor also allows cellular imaging of Mg2+. This work presents the first proof‐of‐concept demonstration of using a TNA catalyst in cellular metal ion imaging.

Keywords: tna enzymes; rna cleaving; enzymes cellular; selection rna; cleaving tna; selection

Journal Title: ChemBioChem
Year Published: 2022

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