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Tree Parzen estimator for global geometry optimization: A benchmark and database of experimental gas‐phase structures of organic molecules

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Finding global and local minima on the potential energy surface is a key task for most studies in computational chemistry. Having a set of possible conformations for chemical structures and… Click to show full abstract

Finding global and local minima on the potential energy surface is a key task for most studies in computational chemistry. Having a set of possible conformations for chemical structures and their corresponding energies, one can judge their chemical activity, understand the mechanisms of reactions, describe the formation of metal‐ligand and ligand‐protein complexes, and so forth. Despite the fact that the interest in various minima search algorithms in computational chemistry arose a while ago (during the formation of this science), new methods are still emerging. These methods allow to perform conformational analysis and geometry optimization faster, more accurately, or for more specific tasks. This article presents the application of a novel global geometry optimization approach based on the Tree Parzen Estimator method. For benchmarking, a database of small organic molecule geometries in the global minimum conformation was created, as well as a software package to perform the tests.

Keywords: global geometry; tree parzen; geometry optimization; chemistry; geometry

Journal Title: Journal of Computational Chemistry
Year Published: 2022

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