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Copper Induces Nitrification by Ammonia-Oxidizing Bacteria and Archaea in Pastoral Soils.

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Copper (Cu) is the main co-factor in the functioning of the ammonia monooxygenase (AMO) enzyme which is responsible for the first step of ammonia oxidation. We report a greenhouse-based pot… Click to show full abstract

Copper (Cu) is the main co-factor in the functioning of the ammonia monooxygenase (AMO) enzyme which is responsible for the first step of ammonia oxidation. We report a greenhouse-based pot experiment that examines the response of ammonia-oxidizing bacteria and archaea (AOB and AOA) to different bioavailable Cu concentrations in three pastoral soils (Recent, Pallic and Pumice soils) planted with ryegrass. Five treatments were used: control (no urine and Cu), urine only at 300 mg N kg-1 soil (Cu0), urine + 1 mg Cu kg-1 soil (Cu1), urine + 10 mg Cu kg-1 soil (Cu10), and urine + 100 mg Cu kg-1 soil (Cu100). Pots were destructively sampled at day 0, 1, 7, 15, and 25 after urine application. AOB/AOA amoA gene abundance was analysed by real-time quantitative PCR at days 1 and 15. AOB amoA gene abundance increased 10.0- and 22.6-fold in the Recent soil, and 2.1- and 2.5-fold in the Pallic soil for the Cu10 compared to Cu0 on days 1 and 15, respectively. In contrast, the Cu100 was associated with a reduction in AOB amoA gene abundance in the Recent and Pallic soils but not in the Pumice soil. This may be due to the influence of soil CEC differences on the bioavailable Cu. Bioavailable Cu in the Recent and Pallic soils influenced nitrification and AOB amoA gene abundance, as evidenced by the strong positive correlation between bioavailable Cu, nitrification, and AOB amoA. However, bioavailable Cu did not influence the nitrification and AOA amoA gene abundance increase. This article is protected by copyright. All rights reserved.

Keywords: amoa gene; gene abundance; ammonia oxidizing; soil

Journal Title: Journal of environmental quality
Year Published: 2022

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