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In Planta Gene Expression Analysis and Colonization of Fusarium oxysporum.

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In planta gene expression analysis and GFP-based confocal microscopy are two powerful techniques that may be coupled to assess the extent and dynamics of plant colonization by a fungal pathogen.… Click to show full abstract

In planta gene expression analysis and GFP-based confocal microscopy are two powerful techniques that may be coupled to assess the extent and dynamics of plant colonization by a fungal pathogen. Here we describe methods to prepare common bean plants for inoculation with a highly virulent strain of Fusarium oxysporum f. sp. phaseoli, quantify the extent of colonization by RT-qPCR, and visualize the colonized tissues by confocal microscopy.

Keywords: fusarium oxysporum; microscopy; gene expression; colonization; expression analysis; planta gene

Journal Title: Methods in molecular biology
Year Published: 2022

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