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Shannon Entropy for Time-Varying Persistence of Cell Migration.

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Cell migration, which can be significantly affected by intracellular signaling pathways (ICSP) and extracellular matrix (ECM), plays a crucial role in many physiological and pathological processes. Cell migration is typically… Click to show full abstract

Cell migration, which can be significantly affected by intracellular signaling pathways (ICSP) and extracellular matrix (ECM), plays a crucial role in many physiological and pathological processes. Cell migration is typically modeled as a persistent random walk (PRW), which depends on two critical motility parameters, i.e., migration speed and persistence time. It is generally very challenging to efficiently and accurately quantify the migration dynamics from noisy experimental data. Here, we introduce the normalized Shannon entropy (SE) based on the Fourier power spectrum of cellular velocity autocovariance function to quantify migration dynamics. The Shannon entropy introduced here possesses the similar physical interpretation as the Gibbs entropy for thermal systems in that SE naturally reflects the degree of order or randomness of cellular migration, attaining the maximal value of unity for purely diffusive migration (i.e., SE = 1 for the most "random" dynamics) and the minimal value of zero for purely ballistic dynamics (i.e., SE = 0 for the most "ordered" dynamics). We also find that SE is strongly correlated with the migration persistence while is less sensitive to the migration speed. Moreover, we introduce the time-varying Shannon entropy based on the wavelet power spectrum of cellular dynamics and demonstrate its superior utility to characterize the time-dependent persistence of cell migration, which is typically resulted from complex and time-varying intra or extracellular mechanisms. We employ our approach to analyze experimental data of in vitro cell migration regulated by distinct intracellular and extracellular mechanisms, exhibiting a rich spectrum of dynamic characteristics. Our analysis indicates that the Shannon entropy and wavelet transform (i.e., SE-based approach) offers a simple and efficient tool to quantify cell migration dynamics in complex microenvironment.

Keywords: persistence; cell migration; time; migration; shannon entropy

Journal Title: Biophysical journal
Year Published: 2021

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