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Traction Force Microscopy by Deep Learning.

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Cells interact mechanically with their surrounding by exerting and sensing forces. Traction force microscopy (TFM), purported to map cell-generated forces or stresses, represents an important tool that has powered the… Click to show full abstract

Cells interact mechanically with their surrounding by exerting and sensing forces. Traction force microscopy (TFM), purported to map cell-generated forces or stresses, represents an important tool that has powered the rapid advances in mechanobiology. However, to solve the ill-posed mathematical problem, conventional TFM involved compromises in accuracy and/or resolution. Here we applied neural network-based deep learning as an alternative approach for TFM. We modified a neural network designed for image processing to predict the vector field of stress from displacements. Furthermore, we adapted a mathematical model for cell migration to generate large sets of simulated stresses and displacements for training and testing the neural network. We found that deep learning based TFM yielded results that resemble those using conventional TFM but at a higher accuracy than several conventional implementations tested. In addition, a trained neural network is appliable to a wide range of conditions including cell size, shape, substrate stiffness, and traction output. The performance of deep learning based TFM makes it an appealing alternative to conventional methods for characterizing mechanical interactions between adherent cells and the environment.

Keywords: traction force; tfm; deep learning; microscopy

Journal Title: Biophysical journal
Year Published: 2021

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