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Performing a BLAST search of the STRSeq BioProject

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Abstract At the 27th ISFG meeting in Seoul, we presented STRSeq, a catalog of high-confidence sequences at forensic short tandem repeat (STR) loci targeted in commercially available sequencing assays. This… Click to show full abstract

Abstract At the 27th ISFG meeting in Seoul, we presented STRSeq, a catalog of high-confidence sequences at forensic short tandem repeat (STR) loci targeted in commercially available sequencing assays. This project was initiated to facilitate the description of sequence-based alleles, providing a framework for communication among laboratories. The STRSeq catalog is maintained at NCBI, in the form of GenBank records organized in a BioProject hierarchy. Herein we describe a method by which a user can query this catalog using the NCBI BLAST application.

Keywords: blast search; performing blast; catalog; strseq bioproject; search strseq

Journal Title: Forensic Science International: Genetics Supplement Series
Year Published: 2017

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