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Cryo-EM Structure of a Bacterial Lipid Transporter YebT.

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The outer membrane (OM) of gram negative bacteria is asymmetric, with LPS on the outer surface and phospholipids (PLs) on the inner surface. This unique organization of OM makes gram… Click to show full abstract

The outer membrane (OM) of gram negative bacteria is asymmetric, with LPS on the outer surface and phospholipids (PLs) on the inner surface. This unique organization of OM makes gram negative bacteria resistant to many toxic chemicals. How this asymmetric distribution of lipids is maintained has been studied for decades with previous reports of an Mla (Maintenance of OM Lipid Asymmetry) system to be involved. Furthermore, the OM of gram negative bacteria is about 20 nm away from inner membrane (IM) where the lipids are synthesized. Therefore how nascent lipids travel across the periplasmic space and arrive the inner surface of OM is another interesting question. YebT is a homologue of MlaD in the Mla pathway but its role in lipid distribution of the OM and IM is largely unknown. Here we report the first high resolution (∼3.0 Å) cryo-EM structure of full-length E. coli YebT in a substrate-bound state. Our structure with details of lipid interaction indicates that YebT is a lipid transporter spanning across between IM and OM. We also demonstrate the symmetry mismatch in YebT and the existence of many other conformations of YebT revealing the intrinsic dynamics of this lipid channel. And a brief discussion on possible mechanisms of lipid transport is also included.

Keywords: yebt; lipid transporter; cryo structure; structure

Journal Title: Journal of molecular biology
Year Published: 2019

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