LAUSR

Abstract The thermal domain (TIR; 2.5–15 μm) delivers unique measurements of plant characteristics that are not possible in other parts of the electromagnetic spectrum. However, these TIR measurements have largely been restricted to laboratory leaf level or coarse spatial resolutions due to the lack of suitable data from airborne and spaceborne instruments. The airborne Hyperspectral Thermal Emission Spectrometer (HyTES) provides an opportunity to retrieve high spectral resolution emissivity and land surface temperature (LST) that can be exploited for canopy level vegetation research. This study is a high spatial resolution analysis of plant species' emissivity and LST using HyTES imagery acquired in the Huntington Botanical Gardens on 2014 July 5 and 2016 Jan 25. Leaf and canopy emissivity variation was identified among 24 plant species and used to determine leaf to canopy scaling capabilities. HyTES LST patterns among species and dates were quantified and correlated to LiDAR derived tree canopy attributes. At the leaf scale, one third of the species showed distinct spectral separation from other species. However, at the canopy scale most species were not spectrally separable. Random forest classification demonstrates the high level of confusion between species with overall accuracies