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Protein dynamics and conformational changes explored by hydrogen/deuterium exchange mass spectrometry.

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Proteins are not rigid bodies under their physiological conditions. Here we discuss a solution-phase structural proteomics technique, hydrogen deuterium exchange coupled with mass spectrometry (HDX-MS), as a means to study… Click to show full abstract

Proteins are not rigid bodies under their physiological conditions. Here we discuss a solution-phase structural proteomics technique, hydrogen deuterium exchange coupled with mass spectrometry (HDX-MS), as a means to study protein dynamics, which can complement other structural approaches. We outline the background theory and highlight the utility of HDX-MS measurements in two case studies involving a nuclear receptor and an innate immunity receptor. We also discuss emerging software advances for improving data analysis and three-dimensional visualization.

Keywords: protein dynamics; deuterium exchange; hydrogen deuterium; mass spectrometry

Journal Title: Current opinion in structural biology
Year Published: 2019

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