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High-Throughput Recognition of Tumor Cells Using Label-Free Elemental Characteristics Based on Interpretable Deep Learning.

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With cancer seriously hampering the increasing life expectancy of people, developing an instant diagnostic method has become an urgent objective. In this work, we developed a label-free laser-induced breakdown spectroscopy… Click to show full abstract

With cancer seriously hampering the increasing life expectancy of people, developing an instant diagnostic method has become an urgent objective. In this work, we developed a label-free laser-induced breakdown spectroscopy (LIBS) method for high-throughput recognition of tumor cells. LIBS spectra were straightly collected from cells dropped on a silicon substrate and built into a deep learning model for simultaneous classification of various cancers. To interpret the result of the deep learning algorithm, gradient-weighted class activation mapping was utilized to a one-dimensional convolution neural network (1D-CNN), and the saliency maps thus obtained amplified the differences between the spectra of cell lines. Overall results showed that the 1D-CNN algorithms achieved a mean sensitivity of 94.00%, a mean specificity of 98.47%, and a mean accuracy of 97.56%. Thus, the proposed method performed satisfactorily and is seen as an interpretable classification process for cancer cell lines.

Keywords: label free; recognition tumor; throughput recognition; learning; high throughput; deep learning

Journal Title: Analytical chemistry
Year Published: 2022

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