LAUSR

Snakebite is a major medical concern in many parts of the world with metalloproteases playing important roles in the pathological effects of Viperidae venoms, including local tissue damage, hemorrhage and coagulopathy. Hemorrhagic Factor 3 (HF3), a metalloprotease from Bothrops jararaca venom, induces local hemorrhage and targets extracellular matrix (ECM) components, including collagens and proteoglycans, and plasma proteins. However, the full substrate repertoire of this metalloprotease is unknown. We report positional proteomic studies identifying >2,000 N-termini, including neo N-termini of HF3 cleavage sites in mouse embryonic fibroblast secretome proteins. Terminal Amine Isotopic Labeling of Substrates (TAILS) analysis identified preference for Leu at the P1' position among candidate HF3 substrates including proteins of the ECM and focal adhesions and the cysteine protease inhibitor cystatin-C. Interestingly, 190 unique peptides matched to annotated cleavage sites in the TopFIND N-termini database, suggesting that these cleavages occurred at a site prone to clevage or might have been generated by other proteases activated upon incubation with HF3, including caspases -3 and -7, cathepsins D and E, granzyme B, and MMPs 2 and 9. Using Proteomic Identification of Cleavage Site Specificity (PICS), a tryptic library derived from THP-1 monocytic cells was used as HF3 substrates for identifying protease cleavage sites and sequence preferences in peptides. 799 unique cleavage sites were detected and, in accordance to TAILS analysis using native secreted protein substrates of MEF cells, revealed a clear preference for Leu at P1'. Taken together, these results greatly expand the known substrate degradome of HF3, and reveals potential new targets, which may serve as basis to better elucidate the complex pathophysiology of snake envenomation.