LAUSR

The blood-brain barrier (BBB) strictly regulates the exchange of ions and molecules between the blood and the central nervous system. The tight junctions (TJs) are multimeric structures that control the transport through the paracellular spaces between adjacent brain endothelial cells of the BBB. Claudin-5 (Cldn5) proteins are essential for the TJ formation. They assemble into multi-protein complexes via cis- interactions within the same cell membrane, and trans-interactions across two contiguous cells. Despite the barrier function of Cldn5 proteins and their role as targets of brain drug delivery strategies, the molecular details of their assembly within TJs are still unclear. Two different structural models have been recently introduced, in which Cldn5 dimers belonging to opposite cells join together to generate paracellular pores. However, a comparison of these models in terms of ionic transport features is still lacking. In this work, we used extended molecular dynamics simulations and free energy calculations to assess the two Cldn5 pore models and investigate the thermodynamic properties of water and physiological ions permeation through them. Despite different FE profiles, both structures present single or multiple FE barriers to ionic permeation, while being permissive to water flux. These results reveal that both models are compatible with the physiological role of Cldn5 TJ strands. By identifying the protein-protein surface at the core of TJ Cldn5 assemblies, our computational investigation provides a basis for the rational design of synthetic peptides and other molecules capable of opening paracellular pores in the BBB.