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Mako is a software tool that converts microbiome data and networks into a graph database and visualizes query results, thus allowing users without programming knowledge to carry out network-based queries.… Click to show full abstract
Mako is a software tool that converts microbiome data and networks into a graph database and visualizes query results, thus allowing users without programming knowledge to carry out network-based queries. Mako is accompanied by a database compiled from 60 microbiome studies that is easily extended with the user's own data. We illustrate mako's strengths by enumerating association partners linked to propionate production and comparing frequencies of different network motifs across habitat types.
Keywords:
fast flexible;
flexible analysis;
microbiome data;
data mako;
linked microbiome;
analysis linked
Journal Title: Nature methods
Year Published: 2021
Link to full text (if available)
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Journal Title: Nature methods
Year Published: 2021
Link to full text (if available)
Share on Social Media: Sign Up to like & get
recommendations!