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Heterochiral coupling in non-ribosomal peptide macrolactamization

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Heterochiral coupling is favoured in abiotic peptide bond formation, whereas biotic peptide bond formation is dominated by homochiral coupling. Here, we report that heterochiral coupling is a rather general paradigm… Click to show full abstract

Heterochiral coupling is favoured in abiotic peptide bond formation, whereas biotic peptide bond formation is dominated by homochiral coupling. Here, we report that heterochiral coupling is a rather general paradigm in the head-to-tail macrolactamization of non-ribosomal peptide biosynthesis. The canonical cis -acting offloading cyclases, such as type I thioesterase (TE) and terminal condensation-like domains, catalyse head-to-tail macrolactamization between N- and C-terminal residues with d - and l -configurations, respectively. In contrast, the penicillin-binding protein-type TEs, a recently identified family of trans -acting cyclases, couple heterochiral residues with complementary stereoselectivity to the canonical one. Thus, a suite of cis - and trans -TE non-ribosomal peptide synthetases could overcome the stereochemical constraints present in heterochiral head-to-tail macrolactam formation in bacterial non-ribosomal peptide biosynthesis. Furthermore, we provide the structural rationale for the C-terminal stereoselectivity of non-canonical offloading cyclases. Penicillin-binding protein-type TEs with broad substrate specificity are potentially applicable as biocatalysts and genetic tools for synthetic biology. Penicillin-binding protein-type thiosterases are recently discovered trans -acting enzymes constructing macrocycles during non-ribosomal peptide biosynthesis. Now, their synthetic potential is explored and a protein crystal structure provides insights into their unusual stereochemical requirement.

Keywords: macrolactamization; ribosomal peptide; non ribosomal; heterochiral coupling

Journal Title: Nature Catalysis
Year Published: 2020

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