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Integrated solid-state NMR and molecular dynamics modeling determines membrane insertion of human β-defensin analog

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Human β-defensins (hBD) play central roles in antimicrobial activities against various microorganisms and in immune-regulation. These peptides perturb phospholipid membranes for function, but it is not well understood how defensins… Click to show full abstract

Human β-defensins (hBD) play central roles in antimicrobial activities against various microorganisms and in immune-regulation. These peptides perturb phospholipid membranes for function, but it is not well understood how defensins approach, insert and finally disrupt membranes on the molecular level. Here we show that hBD-3 analogs interact with lipid bilayers through a conserved surface that is formed by two adjacent loops in the solution structure. By integrating a collection of 13C, 1H and 31P solid-state NMR methods with long-term molecular dynamic simulations, we reveal that membrane-binding rigidifies the peptide, enhances structural polymorphism, and promotes β-strand conformation. The peptide colocalizes with negatively charged lipids, confines the headgroup motion, and deforms membrane into smaller, ellipsoidal vesicles. This study designates the residue-specific, membrane-bound topology of hBD-3 analogs, serves as the basis for further elucidating the function-relevant structure and dynamics of other defensins, and facilitates the development of defensin-mimetic antibiotics, antifungals, and anti-inflammatories.Xue Kang, Christopher Elson et al. show that human β-defensin-3 analogs form two adjacent loops within their structure that allows them to interact with lipid bilayers. They show that membrane-binding makes the peptides rigid, enhancing their polymorphism and promoting β-strand conformation.

Keywords: solid state; defensin; state nmr; human defensin; membrane

Journal Title: Communications Biology
Year Published: 2019

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