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Cycloaddition enabled mutational profiling of 5-vinyluridine in RNA.

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We report the detection of 5-vinyluridine (5-VUrd) in RNA at single nucleotide resolution via mutational profiling. Maleimide cycloadducts with 5-VUrd in RNA cause a stop in primer extension during reverse… Click to show full abstract

We report the detection of 5-vinyluridine (5-VUrd) in RNA at single nucleotide resolution via mutational profiling. Maleimide cycloadducts with 5-VUrd in RNA cause a stop in primer extension during reverse transcription, and the full-length cDNA product from reverse transcription contains misincorporation across the cycloadduct site.

Keywords: rna; profiling vinyluridine; mutational profiling; enabled mutational; cycloaddition enabled

Journal Title: Chemical communications
Year Published: 2023

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