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mapDATAge: a ShinyR package to chart ancient DNA data through space and time

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Abstract Summary Ancient DNA datasets are increasingly difficult to visualize for users lacking computational experience. Here, we describe mapDATAge, which aims to provide user-friendly automated modules for the interactive mapping… Click to show full abstract

Abstract Summary Ancient DNA datasets are increasingly difficult to visualize for users lacking computational experience. Here, we describe mapDATAge, which aims to provide user-friendly automated modules for the interactive mapping of allele, haplogroup and/or ancestry distributions through space and time. mapDATAge enhances collaborative data sharing while assisting the assessment and reporting of spatiotemporal patterns of genetic changes. Availability and implementation mapDATAge is a Shiny R application designed for exploring spatiotemporal patterns in ancient DNA data through a graphical user interface. It is freely available under GNU Public License in Github: https://github.com/xuefenfei712/mapDATAge. Supplementary information Supplementary data are available at Bioinformatics online.

Keywords: mapdatage; ancient dna; dna data; space time

Journal Title: Bioinformatics
Year Published: 2022

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