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Motivation: Microsatellites are a widely‐used marker system in plant genetics and forensics. The development of reliable microsatellite markers from resequencing data is challenging. Results: We extended MISA, a computational tool… Click to show full abstract
Motivation: Microsatellites are a widely‐used marker system in plant genetics and forensics. The development of reliable microsatellite markers from resequencing data is challenging. Results: We extended MISA, a computational tool assisting the development of microsatellite markers, and reimplemented it as a web‐based application. We improved compound microsatellite detection and added the possibility to display and export MISA results in GFF3 format for downstream analysis. Availability and Implementation: MISA‐web can be accessed under http://misaweb.ipk‐gatersleben.de/. The website provides tutorials, usage note as well as download links to the source code. Contact: scholz@ipk‐gatersleben.de
Journal Title: Bioinformatics
Year Published: 2017
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