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A novel synthetic-genetic-array based yeast one-hybrid system for high discovery rate and short processing time.

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The eukaryotic gene expression is often tightly regulated by interactions between transcription factors (TFs) and their DNA cis-targets. Yeast one-hybrid (Y1H) is one of the most extensively used methods to… Click to show full abstract

The eukaryotic gene expression is often tightly regulated by interactions between transcription factors (TFs) and their DNA cis-targets. Yeast one-hybrid (Y1H) is one of the most extensively used methods to discover these interactions. We developed a high-throughput meiosis-directed yeast one-hybrid system using the Magic Markers of the Synthetic Genetic Array analysis. The system has a transcription factor-DNA interaction discovery rate twice as high as the conventional diploid-mating approach and a processing time nearly one-tenth of the haploid-transformation method. The system also offers the highest accuracy in identifying TF-DNA interactions that can be authenticated in vivo by chromatin immunoprecipitation. With these unique features, this meiosis-directed Y1H system is particularly suited for constructing novel and comprehensive genome-scale gene regulatory networks for various organisms.

Keywords: hybrid system; one hybrid; system; genetic array; yeast one; synthetic genetic

Journal Title: Genome research
Year Published: 2019

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