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SNP-mediated binding of TBX1 to the enhancer element of IL-10 reduces the risk of Behcet's disease.

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Aims: The genetic association between Behcet's disease susceptibility and IL-10 has been confirmed in multiple cohorts, but the underlying mechanism of this association remains unclear. Materials & methods: We combined public… Click to show full abstract

Aims: The genetic association between Behcet's disease susceptibility and IL-10 has been confirmed in multiple cohorts, but the underlying mechanism of this association remains unclear. Materials & methods: We combined public resources and laboratory experiments (electrophoretic mobility shift assays, chromatin immunoprecipitation, luciferase reporter gene and CRISPR/Cas9 genome editing) to analyze transcription factor binding and enhancer activity controlling IL-10 expression. Results & conclusion: The T allele of noncoding rs3024490 within super-enhancer elements is able to specifically bind TBX1 and, in turn, promotes the enhancer activity and increased expression of IL-10. However, a relative deficiency in TBX1 in Behcet's disease patients leads to the low expression of IL-10 and increased risk of developing Behcet's disease.

Keywords: binding tbx1; behcet disease; disease; mediated binding; snp mediated; enhancer

Journal Title: Epigenomics
Year Published: 2021

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