LAUSR

Simple Summary Microsporidia are intracellular parasites that have detrimental effects on their various invertebrate and vertebrate hosts. The microsporidia pathogenic to honeybees and bumblebees belong to the genus Vairimorpha (previously Nosema). Among these, V. bombi is the most widespread species worldwide and it infects a variety of bumblebee species. In this study, we investigated the infection of V. bombi among Japanese native bumblebees and the alien species, Bombus terrestris, established in Japan, using PCR and microscopy. We discovered that V. bombi infected the subgenus Bombus s. str. species/subspecies with a low prevalence in areas both with and without the presence of B. terrestris, suggesting that V. bombi may be native to Japan. In contrast, a newly discovered microsporidian parasite that is phylogenetically distinct from V. bombi was found to infect the subgenus Diversobombus species/subspecies with a high prevalence. Hence, if the new microsporidian species does not negatively affect the host and is vertically transmitted from queen to offspring, it may coexist with its host. In addition, this may suggest that V. bombi and the new microsporidium have different life history strategies. Abstract Microsporidia are spore-forming intracellular parasites of various invertebrates and vertebrates. Vairimorpha bombi negatively affects the fitness of bumblebees and its prevalence correlates with declining bumblebee populations. The invasive alien species Bombus terrestris colonized Japan and possibly introduced new parasites. To assess the infection prevalence of V. bombi in Japanese bumblebees and B. terrestris, we investigated V. bombi infections using PCR and microscopy. The prevalence of sporulating V. bombi infections in three Bombus s. str. species/subspecies was low, whereas that of non/low-sporulating Vairimorpha sp. infections in three Diversobombus species/subspecies was high. Invasive B. terrestris showed low prevalence of non/low-sporulating V. bombi infections and shared the same V. bombi haplotype with B. hypocrita found in Hokkaido, where B. terrestris is present, and in Honshu, where B. terrestris is absent. Although V. bombi may have been introduced with B. terrestris colonies imported from Europe, it seems to be originally distributed in Japan. Furthermore, a new Vairimorpha sp. was found in Japanese bumblebee species. V. bombi and Vairimorpha sp. showed different organ and host specificities in bumblebees. There are no reports on the specific effects of other Vairimorpha spp. on bumblebees; further studies are needed to clarify the individual characteristics of Vairimorpha spp.