Application of random amplified polymorphism DNA and 16S-23S rDNA intergenic spacer polymerase chain reaction-restriction fragment length polymorphism to predict major Streptococcus suis clonal complexes isolated from humans and pigs.
Sign Up to like & getrecommendations! Published in 2019 at "Molecular and cellular probes"
DOI: 10.1016/j.mcp.2018.12.002
Abstract: Random amplification of polymorphic DNA (RAPD) and 16S-23S rDNA intergenic spacer polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) were applied and evaluated to determine clonal complexes (CCs) of 684 Streptococcus suis isolates from pigs and… read more here.
Keywords: 16s 23s; intergenic spacer; rdna intergenic; 23s rdna ... See more keywords
Targeted next-generation sequencing of the 16S-23S rRNA region for culture-independent bacterial identification - increased discrimination of closely related species
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DOI: 10.1038/s41598-017-03458-6
Abstract: The aim of this study was to develop an easy-to-use culture-free diagnostic method based on next generation sequencing (NGS) of PCR amplification products encompassing whole 16S-23S rRNA region to improve the resolution of bacterial species… read more here.
Keywords: 16s 23s; identification; rrna region; culture ... See more keywords
Timaviella dunensis sp. nov. from sand dunes of the Baltic Sea, Germany, and emendation of Timaviella edaphica (Elenkin) O.M. Vynogr. & Mikhailyuk (Synechococcales, Cyanobacteria) based on an integrative approach.
Sign Up to like & getrecommendations! Published in 2022 at "Phytotaxa"
DOI: 10.11646/phytotaxa.532.3.1
Abstract: Timaviella Sciuto & Moro is a recently established cryptic genus of cyanobacteria separated from the morphologically close Leptolyngbya due to clear differences in the 16S rRNA gene sequence and the 16S-23S ITS region secondary structure.… read more here.
Keywords: germany; timaviella; 16s 23s; 16s rrna ... See more keywords
Development of a reference data set for assigning Streptococcus and Enterococcus species based on next generation sequencing of the 16S–23S rRNA region
Sign Up to like & getrecommendations! Published in 2019 at "Antimicrobial Resistance and Infection Control"
DOI: 10.1186/s13756-019-0622-3
Abstract: BackgroundMany members of Streptococcus and Enterococcus genera are clinically relevant opportunistic pathogens warranting accurate and rapid identification for targeted therapy. Currently, the developed method based on next generation sequencing (NGS) of the 16S–23S rRNA region… read more here.
Keywords: 16s 23s; reference; identification; rrna region ... See more keywords
Development and Validation of a Reference Data Set for Assigning Staphylococcus Species Based on Next-Generation Sequencing of the 16S-23S rRNA Region
Sign Up to like & getrecommendations! Published in 2019 at "Frontiers in Cellular and Infection Microbiology"
DOI: 10.3389/fcimb.2019.00278
Abstract: Many members of the Staphylococcus genus are clinically relevant opportunistic pathogens that warrant accurate and rapid identification for targeted therapy. The aim of this study was to develop a careful assignment scheme for staphylococcal species… read more here.
Keywords: 16s 23s; reference; ngs 16s; rrna region ... See more keywords
Reconstruction of the rRNA Sequences of LUCA, with Bioinformatic Implication of the Local Similarities Shared by Them
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DOI: 10.3390/biology11060837
Abstract: Simple Summary In order to explore the origin of 16S, 5S, and 23S ribosomal RNAs in novel views and methods, full lengths of the three rRNA sequences of the last universal common ancestor were reconstructed… read more here.
Keywords: 16s 23s; rrna sequences; similarities shared; short fragments ... See more keywords