Barnaba: software for analysis of nucleic acid structures and trajectories.
Sign Up to like & getrecommendations! Published in 2019 at "RNA"
DOI: 10.1261/rna.067678.118
Abstract: RNA molecules are highly dynamic systems characterized by a complex interplay between sequence, structure, dynamics, and function. Molecular simulations can potentially provide powerful insights into the nature of these relationships. The analysis of structures and… read more here.
Keywords: analysis nucleic; acid structures; analysis; structures trajectories ... See more keywords
In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles
Sign Up to like & getrecommendations! Published in 2020 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2020.01583
Abstract: Non-canonical nucleic acid structures play important roles in the regulation of molecular processes. Considering the importance of the ongoing coronavirus crisis, we decided to evaluate genomes of all coronaviruses sequenced to date (stated more broadly,… read more here.
Keywords: canonical nucleic; acid structures; non canonical; sars cov ... See more keywords
Developing Community Resources for Nucleic Acid Structures
Sign Up to like & getrecommendations! Published in 2022 at "Life"
DOI: 10.3390/life12040540
Abstract: In this review, we describe the creation of the Nucleic Acid Database (NDB) at Rutgers University and how it became a testbed for the current infrastructure of the RCSB Protein Data Bank. We describe some… read more here.
Keywords: acid structures; resources nucleic; nucleic acid; developing community ... See more keywords