Comparative genomic analysis for nucleotide, codon, and amino acid usage patterns of mycoplasmas
Sign Up to like & getrecommendations! Published in 2018 at "Journal of Basic Microbiology"
DOI: 10.1002/jobm.201700490
Abstract: The evolutionary factors in influencing the genetic characteristics of nucleotide, synonymous codon, and amino acid usage of 18 mycoplasma species were analyzed. The nucleotide usage at the 1st and 2nd codon position which determines amino… read more here.
Keywords: amino acid; nucleotide usage; acid usage; codon ... See more keywords
Natural selection shaped the evolution of amino acid usage in mammalian toll like receptor genes.
Sign Up to like & getrecommendations! Published in 2022 at "Computational biology and chemistry"
DOI: 10.1016/j.compbiolchem.2022.107637
Abstract: Toll-like receptors (TLRs) are important as they are able to sense diverse set of pathogens associated molecular patterns (PAMPs) as ligands. These receptors are involved in functions such as immune response, development of signaling process… read more here.
Keywords: acid usage; selection; amino acid; tlr genes ... See more keywords
Evolution of Viral Pathogens Follows a Linear Order
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DOI: 10.1128/spectrum.01655-21
Abstract: This study reports a comparative analysis of amino acid usage within several key viral genera that are prone to triggering outbreaks. Interestingly, there is evidence that the amino acid usage within the viral genomes is… read more here.
Keywords: acid usage; usage within; amino acid; linear order ... See more keywords
HIV Progression Depends on Codon and Amino Acid Usage Profile of Envelope Protein and Associated Host-Genetic Influence
Sign Up to like & getrecommendations! Published in 2017 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2017.01083
Abstract: Acquired immune deficiency syndrome (AIDS) is a spectrum of conditions caused by infection with the human immunodeficiency virus (HIV). Two types of HIV have been characterized: HIV-1 and HIV-2. The present study investigated whether evolutionary… read more here.
Keywords: env genes; amino acid; hiv; acid usage ... See more keywords