Articles with "active pocket" as a keyword



Replacement of Loops at the Entrance of the Active Pocket of Streptococcus thermophilus 4,6-α-Glucanotransferase Changes Its Catalytic Activity and Product Specificity.

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Published in 2024 at "Journal of agricultural and food chemistry"

DOI: 10.1021/acs.jafc.4c00803

Abstract: To explore the roles of loops around active pocket in the reuteran type 4,6-α-glucanotransferase (StGtfB) from S. thermophilus, they were individually or simultaneously replaced with those of an isomalto/maltopolysaccharides type 4,6-α-glucanotransferase from L. reuteri. StGtfB… read more here.

Keywords: active pocket; glucanotransferase; activity product; replacement ... See more keywords

Residue-Orientation-Dependent Dynamics and Selectivity of Active Pocket in Microbe Class I Terpene Cyclases

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Published in 2020 at "Journal of chemical information and modeling"

DOI: 10.1021/acs.jcim.0c00159

Abstract: Microbe class I terpene cyclases (TPCs) are responsible for deriving numerous functionally and structurally diverse groups of terpenoids natural products. The conformational change of their active pockets from "open" state to "closed" state upon substrate… read more here.

Keywords: residue orientation; pocket; microbe class; active pocket ... See more keywords

Geometric Remodeling of Nitrilase Active Pocket Based on ALF-Scanning Strategy To Enhance Aromatic Nitrile Substrate Preference and Catalytic Efficiency

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Published in 2023 at "Applied and Environmental Microbiology"

DOI: 10.1128/aem.00220-23

Abstract: In this study, the active pocket was largely remodeled based on the ALF-scanning strategy we developed. It is believed that ALF-scanning not only could be employed for substrate preference modification but might also play a… read more here.

Keywords: aromatic nitrile; alf scanning; active pocket; preference ... See more keywords