Identification of Active Transposable Elements in Plants: The Mobilome-Seq Approach.
Sign Up to like & getrecommendations! Published in 2021 at "Methods in molecular biology"
DOI: 10.1007/978-1-0716-1134-0_8
Abstract: Transposable elements (TEs) are the main component of eukaryotic genomes. Besides their impact on genome size, TEs are also functionally important as they can alter gene expression and influence phenotypic variation. In plants, most top-down… read more here.
Keywords: plants mobilome; identification active; active transposable; approach ... See more keywords
ExplorATE: a new pipeline to explore active transposable elements from RNA-seq data
Sign Up to like & getrecommendations! Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btac354
Abstract: MOTIVATION Transposable elements (TEs) are ubiquitous in genomes and many remain active. TEs comprise an important fraction of the transcriptomes with potential effects on the host genome, either by generating deleterious mutations or promoting evolutionary… read more here.
Keywords: transposable elements; explorate; explore active; new pipeline ... See more keywords