GRASShopPER—An algorithm for de novo assembly based on GPU alignments
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DOI: 10.1371/journal.pone.0202355
Abstract: Next generation sequencers produce billions of short DNA sequences in a massively parallel manner, which causes a great computational challenge in accurately reconstructing a genome sequence de novo using these short sequences. Here, we propose… read more here.
Keywords: novo assembly; grasshopper algorithm; based gpu; assembly based ... See more keywords