Where to look and how to look: Combining global sensitivity analysis with fast/slow analysis to study multi-timescale oscillations.
Sign Up to like & getrecommendations! Published in 2019 at "Mathematical biosciences"
DOI: 10.1016/j.mbs.2019.05.004
Abstract: Parameterized systems of nonlinear ordinary differential equations, the type of system that is often used in mathematical models for biological systems, can be of sufficient complexity that it can take years to appreciate the full… read more here.
Keywords: fast slow; global sensitivity; system; analysis ... See more keywords
Local Normal Mode Analysis for Fast Loop Conformational Sampling
Sign Up to like & getrecommendations! Published in 2022 at "Journal of Chemical Information and Modeling"
DOI: 10.1021/acs.jcim.2c00870
Abstract: We propose and validate a novel method to efficiently explore local protein loop conformations based on a new formalism for constrained normal mode analysis (NMA) in internal coordinates. The manifold of possible loop configurations imposed… read more here.
Keywords: normal mode; analysis fast; mode analysis; local normal ... See more keywords
Analysis of NB Fast-Ion Loss Mechanisms in MHD Quiescent LHD Plasmas
Sign Up to like & getrecommendations! Published in 2021 at "Plasma and Fusion Research"
DOI: 10.1585/pfr.16.2402052
Abstract: Hideo NUGA1), Ryohsuke SEKI1,2), Kunihiro OGAWA1,2), Shuji KAMIO1), Yutaka FUJIWARA1), Hiroyuki YAMAGUCHI1,2), Masaki OSAKABE1,2), Mitsutaka ISOBE1,2), Sadayoshi MURAKAMI3) and Masayuki YOKOYAMA1,2) 1)National Institute for Fusion Sciences, National Institutes of Natural Sciences, Toki 509-5292, Japan 2)The… read more here.
Keywords: mechanisms mhd; fast ion; ion loss; loss mechanisms ... See more keywords