Analysis of RNA Metabolism in Fission Yeast.
Sign Up to like & getrecommendations! Published in 2017 at "Cold Spring Harbor protocols"
DOI: 10.1101/pdb.top079798
Abstract: Here we focus on the biogenesis and function of messenger RNA (mRNA) in fission yeast cells. Following a general introduction that also briefly touches on other classes of RNA, we provide an overview of methods… read more here.
Keywords: fission; metabolism fission; rna metabolism; analysis rna ... See more keywords
TCC-GUI: a Shiny-based application for differential expression analysis of RNA-Seq count data
Sign Up to like & getrecommendations! Published in 2019 at "BMC Research Notes"
DOI: 10.1186/s13104-019-4179-2
Abstract: ObjectiveDifferential expression (DE) is a fundamental step in the analysis of RNA-Seq count data. We had previously developed an R/Bioconductor package (called TCC) for this purpose. While this package has the unique feature of an… read more here.
Keywords: gui; tcc gui; analysis rna; rna seq ... See more keywords
Integrative Analysis of RNA Expression and Regulatory Networks in Mice Liver Infected by Echinococcus multilocularis
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Cell and Developmental Biology"
DOI: 10.3389/fcell.2022.798551
Abstract: The larvae of Echinococcus multilocularis causes alveolar echinococcosis, which poses a great threat to the public health. However, the molecular mechanisms underlying the host and parasite interactions are still unclear. Exploring the transcriptomic maps of… read more here.
Keywords: integrative analysis; mrna mirna; analysis rna; echinococcus multilocularis ... See more keywords
Toward Time-Resolved Analysis of RNA Metabolism in Archaea Using 4-Thiouracil
Sign Up to like & getrecommendations! Published in 2017 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2017.00286
Abstract: Archaea are widespread organisms colonizing almost every habitat on Earth. However, the molecular biology of archaea still remains relatively uncharacterized. RNA metabolism is a central cellular process, which has been extensively analyzed in both bacteria… read more here.
Keywords: rna metabolism; analysis rna; rna; time ... See more keywords
Global analysis of A-to-I RNA editing reveals association with common disease variants
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DOI: 10.7717/peerj.4466
Abstract: RNA editing modifies transcripts and may alter their regulation or function. In humans, the most common modification is adenosine to inosine (A-to-I). We examined the global characteristics of RNA editing in 4,301 human tissue samples.… read more here.
Keywords: global analysis; rna; association; rna editing ... See more keywords