LiveFly: A Toolbox for the Analysis of Transcription Dynamics in Live Drosophila Embryos.
Sign Up to like & getrecommendations! Published in 2018 at "Methods in molecular biology"
DOI: 10.1007/978-1-4939-8772-6_11
Abstract: We present the LiveFly toolbox for quantitative analysis of transcription dynamics in live Drosophila embryos. The toolbox allows users to process two-color 3D confocal movies acquired using nuclei-labeling and the fluorescent RNA-tagging system described in… read more here.
Keywords: toolbox; livefly toolbox; analysis transcription; live drosophila ... See more keywords
Accurate differential analysis of transcription factor activity from gene expression
Sign Up to like & getrecommendations! Published in 2019 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btz398
Abstract: MOTIVATION Activity of transcriptional regulators are crucial in elucidating the mechanism of phenotypes. However regulatory activity hypotheses are difficult to experimentally test. Therefore we need accurate and reliable computational methods for regulator activity inference. There… read more here.
Keywords: differential analysis; analysis transcription; factor activity; transcription factor ... See more keywords