MedTator: a serverless annotation tool for corpus development
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DOI: 10.1093/bioinformatics/btab880
Abstract: SUMMARY Building a high-quality annotation corpus requires expenditure of considerable time and expertise, particularly for biomedical and clinical research applications. Most existing annotation tools provide many advanced features to cover a variety of needs where… read more here.
Keywords: serverless annotation; medtator serverless; medtator; annotation ... See more keywords
Pharokka: a fast scalable bacteriophage annotation tool
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DOI: 10.1093/bioinformatics/btac776
Abstract: Abstract Summary In recent years, there has been an increasing interest in bacteriophages, which has led to growing numbers of bacteriophage genomic sequences becoming available. Consequently, there is a need for a rapid and consistent… read more here.
Keywords: tool; pharokka fast; annotation tool; bacteriophage ... See more keywords
Automatic Annotation Tool to Support Supervised Machine Learning for Scaphoid Fracture Detection
Sign Up to like & getrecommendations! Published in 2018 at "Studies in health technology and informatics"
DOI: 10.3233/978-1-61499-921-8-210
Abstract: The aim of this work is to develop and validate an automatic annotation tool for the detection and bone localization of scaphoid fractures in radiology reports. To achieve this goal, a rule-based method using a… read more here.
Keywords: detection; tool support; tool; annotation tool ... See more keywords
Development and Preliminary Evaluation of a Visual Annotation Tool to Rapidly Collect Expert-Annotated Weight Errors in Pediatric Growth Charts
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DOI: 10.3233/shti190344
Abstract: Patient weights can be entered incorrectly into electronic health record (EHR) systems. These weight errors can cause significant patient harm especially in pediatrics where weight-based dosing is pervasively used. Determining weight errors through manual chart… read more here.
Keywords: visual annotation; annotation tool; weight errors; annotated weight ... See more keywords
User-Centered Evaluation of a Visual Annotation Tool for Rapid Assessment of Pediatric Weight Entry Errors
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DOI: 10.3233/shti220130
Abstract: Weight entry errors can cause significant patient harm in pediatrics due to pervasive weight-based dosing practices. While computerized algorithms can assist in error detection, they have not achieved high sensitivity and specificity to be further… read more here.
Keywords: tool; annotation; visual annotation; weight entry ... See more keywords
ANNO: A General Annotation Tool for Bilingual Clinical Note Information Extraction
Sign Up to like & getrecommendations! Published in 2022 at "Healthcare Informatics Research"
DOI: 10.4258/hir.2022.28.1.89
Abstract: Objectives This study was conducted to develop a generalizable annotation tool for bilingual complex clinical text annotation, which led to the design and development of a clinical text annotation tool, ANNO. Methods We designed ANNO… read more here.
Keywords: annotation tool; regular expression; tool bilingual; annotation ... See more keywords