PanExplorer: a web-based tool for exploratory analysis and visualization of bacterial pan-genomes
Sign Up to like & getrecommendations! Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btac504
Abstract: Abstract Motivation As pan-genome approaches are largely employed for bacterial comparative genomics and evolution analyses, but still difficult to be carried out by non-bioinformatician biologists, there is a need for an innovative tool facilitating the… read more here.
Keywords: web based; pan genomes; pan; bacterial pan ... See more keywords
Accurate reconstruction of bacterial pan- and core genomes with PEPPAN.
Sign Up to like & getrecommendations! Published in 2020 at "Genome research"
DOI: 10.1101/gr.260828.120
Abstract: Bacterial genomes can contain traces of a complex evolutionary history, including extensive homologous recombination, gene loss, gene duplications, and horizontal gene transfer. To reconstruct the phylogenetic and population history of a set of multiple bacteria,… read more here.
Keywords: reconstruction bacterial; accurate reconstruction; bacterial pan; gene ... See more keywords