In-gel and OFFGEL-based proteomic approach for authentication of meat species from minced meat and meat products.
Sign Up to like & getrecommendations! Published in 2018 at "Journal of the science of food and agriculture"
DOI: 10.1002/jsfa.8572
Abstract: BACKGROUND Fraudulent mislabelling of processed meat products on a global scale that cannot be detected using conventional techniques necessitates sensitive, robust and accurate methods of meat authentication to ensure food safety and public health. In… read more here.
Keywords: based proteomic; authentication; meat; gel offgel ... See more keywords
iTRAQ-based proteomic analysis reveals changes in response to UV-B treatment in soybean sprouts.
Sign Up to like & getrecommendations! Published in 2019 at "Food chemistry"
DOI: 10.1016/j.foodchem.2018.09.064
Abstract: It has been shown that 15 μW·cm-2 UV-B radiation has the most pronounced effects on γ-aminobutiric acid (GABA), inositol 1,4,5-trisphosphate (IP3) and abscisic acid (ABA) accumulation in 4-day-old soybean sprouts. Nevertheless, its mechanism of action, from… read more here.
Keywords: soybean sprouts; based proteomic; treatment; proteomic analysis ... See more keywords
ITRAQ-based proteomic analysis of apple buds provides new insights into regulatory mechanisms of flowering in response to shoot bending
Sign Up to like & getrecommendations! Published in 2021 at "Scientia Horticulturae"
DOI: 10.1016/j.scienta.2021.110526
Abstract: Abstract Flowering is an important life cycle stage in apple trees, and young ‘Nagafu No. 2’ produce limited inferior flower buds. Shoot bending, an effective agronomic measure, is widely used to promote flowering but little… read more here.
Keywords: apple; itraq based; shoot bending; proteins involved ... See more keywords
iTRAQ-based proteomic profiling of granulosa cells from lamb and ewe after superstimulation.
Sign Up to like & getrecommendations! Published in 2017 at "Theriogenology"
DOI: 10.1016/j.theriogenology.2017.06.014
Abstract: The number of oocytes obtained from lambs after FSH treatment is far greater than those acquired from adult ewes. However, these oocytes typically have reduced viability in comparison with adult ewe oocytes. However, the molecular… read more here.
Keywords: granulosa cells; based proteomic; analysis; lamb ewe ... See more keywords
Association of Patatin-Based Proteomic Distances with Potato ( Solanum tuberosum L.) Quality Traits.
Sign Up to like & getrecommendations! Published in 2018 at "Journal of agricultural and food chemistry"
DOI: 10.1021/acs.jafc.8b03203
Abstract: Patatin is the major tuber storage protein constituted by multiple isoforms highly variable across potato ( S. tuberosum) varieties. Here, we report a first association study of the variability of patatin isoforms between cultivars with… read more here.
Keywords: quality traits; patatin based; based proteomic; patatin ... See more keywords
MSstats Version 4.0: Statistical Analyses of Quantitative Mass Spectrometry-Based Proteomic Experiments with Chromatography-Based Quantification at Scale.
Sign Up to like & getrecommendations! Published in 2023 at "Journal of proteome research"
DOI: 10.1021/acs.jproteome.2c00834
Abstract: The MSstats R-Bioconductor family of packages is widely used for statistical analyses of quantitative bottom-up mass spectrometry-based proteomic experiments to detect differentially abundant proteins. It is applicable to a variety of experimental designs and data… read more here.
Keywords: mass spectrometry; based proteomic; statistical analyses; proteomic experiments ... See more keywords
Discovery of Non-Cysteine-Targeting Covalent Inhibitors by Activity-Based Proteomic Screening with a Cysteine-Reactive Probe.
Sign Up to like & getrecommendations! Published in 2022 at "ACS chemical biology"
DOI: 10.1021/acschembio.1c00824
Abstract: Covalent inhibitors of enzymes are increasingly appreciated as pharmaceutical seeds, yet discovering non-cysteine-targeting inhibitors remains challenging. Herein, we report an intriguing experience during our activity-based proteomic screening of 1601 reactive small molecules, in which we… read more here.
Keywords: based proteomic; activity based; probe; covalent inhibitors ... See more keywords
Pan-cancer molecular subtypes revealed by mass-spectrometry-based proteomic characterization of more than 500 human cancers
Sign Up to like & getrecommendations! Published in 2019 at "Nature Communications"
DOI: 10.1038/s41467-019-13528-0
Abstract: Mass-spectrometry-based proteomic profiling of human cancers has the potential for pan-cancer analyses to identify molecular subtypes and associated pathway features that might be otherwise missed using transcriptomics. Here, we classify 532 cancers, representing six tissue-based… read more here.
Keywords: pan cancer; mass spectrometry; based proteomic; human cancers ... See more keywords
iTRAQ based proteomic analysis of PM2.5 induced lung damage
Sign Up to like & getrecommendations! Published in 2019 at "RSC Advances"
DOI: 10.1039/c9ra00252a
Abstract: Research on biomarkers and pathways provides new diagnostic, preventive and therapeutic strategies for PM2.5 correlated lung diseases. read more here.
Keywords: analysis pm2; pm2 induced; itraq based; induced lung ... See more keywords
Unsupervised clustering to differentiate rheumatoid arthritis patients based on proteomic signatures.
Sign Up to like & getrecommendations! Published in 2023 at "Scandinavian journal of rheumatology"
DOI: 10.1080/03009742.2023.2196781
Abstract: OBJECTIVE Patients with rheumatoid arthritis (RA) have different presentations and prognoses. Cluster analysis based on proteomic signatures creates independent phenogroups of patients with different pathophysiological backgrounds. We aimed to identify distinct pathophysiological clusters of RA… read more here.
Keywords: proteomic signatures; unsupervised clustering; patients based; rheumatoid arthritis ... See more keywords
mpwR: an R package for comparing performance of mass spectrometry-based proteomic workflows.
Sign Up to like & getrecommendations! Published in 2023 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btad358
Abstract: SUMMARY mpwR is an R package for a standardized comparison of mass spectrometry (MS)-based proteomic label-free workflows recorded by data-dependent or data-independent spectral acquisition. The user-friendly design allows easy access to compare the influence of… read more here.
Keywords: mass spectrometry; based proteomic; mpwr package; package ... See more keywords