Articles with "based sequencing" as a keyword



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Evaluation of Probiotic Diversity from Soybean (Glycine max) Seeds and Sprouts Using Illumina-Based Sequencing Method

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Published in 2017 at "Probiotics and Antimicrobial Proteins"

DOI: 10.1007/s12602-017-9305-7

Abstract: There is increasing interest in the use of plant probiotics as environmental-friendly and healthy biofertilizers. The study aimed at selecting for novel probiotic candidates of soybean (Glycine max). The bacteriome and mycobiome of soybean sprouts… read more here.

Keywords: based sequencing; soybean glycine; illumina based; seeds sprouts ... See more keywords
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Evaluation of the Diversity of Probiotic Bacillus, Clostridium, and Bifidobacterium Using the Illumina-Based Sequencing Method

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Published in 2017 at "Probiotics and Antimicrobial Proteins"

DOI: 10.1007/s12602-017-9337-z

Abstract: Bacterial species of Bacillus, Lactobacillus, and Bifidobacterium in the intestinal tract have been used as probiotics. Selections for probiotic candidates by the culture-based approaches are time-consuming and labor-consuming. The aim of this study was to… read more here.

Keywords: bacillus clostridium; clostridium bifidobacterium; based sequencing; bifidobacterium ... See more keywords
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16S rRNA-Based Microbiota Profiling Assists Conventional Culture Analysis of Airway Samples from Pediatric Cystic Fibrosis Patients

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Published in 2023 at "Microbiology Spectrum"

DOI: 10.1128/spectrum.04057-22

Abstract: Early and effective treatment of pulmonary infections in cystic fibrosis is vital to prevent chronic lung damage. Although microbial diagnostics and treatment decisions are still based on conventional culture methods, research is gradually focusing more… read more here.

Keywords: conventional culture; based sequencing; treatment; cystic fibrosis ... See more keywords
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Excess primer degradation by Exo I improves the preparation of 3' cDNA ligation-based sequencing libraries.

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Published in 2019 at "BioTechniques"

DOI: 10.2144/btn-2018-0178

Abstract: RNA sequencing library construction using single-stranded ligation of a DNA adapter to 3' ends of cDNAs often produces primer-adapter byproducts, which compete with cDNA-adapter ligation products during library amplification and, therefore, reduces the number of… read more here.

Keywords: cdna ligation; based sequencing; ligation; ligation based ... See more keywords
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Rapid Genomic Characterization of SARS-CoV-2 by Direct Amplicon-Based Sequencing Through Comparison of MinION and Illumina iSeq100TM System

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Published in 2020 at "Frontiers in Microbiology"

DOI: 10.3389/fmicb.2020.571328

Abstract: Global human health is increasingly challenged by emerging viral threats, especially those observed over the last 20 years with coronavirus-related human diseases, such as the Severe Acute Respiratory Syndrome (SARS) and the Middle East Respiratory… read more here.

Keywords: based sequencing; amplicon based; minion; iseq100tm system ... See more keywords