Revealing the Arabidopsis AtGRP7 mRNA binding proteome by specific enhanced RNA interactome capture
Sign Up to like & getrecommendations! Published in 2024 at "BMC Plant Biology"
DOI: 10.1186/s12870-024-05249-4
Abstract: Background The interaction of proteins with RNA in the cell is crucial to orchestrate all steps of RNA processing. RNA interactome capture (RIC) techniques have been implemented to catalogue RNA-binding proteins in the cell. In… read more here.
Keywords: arabidopsis; rna interactome; binding proteome; rna ... See more keywords
Uukuniemi virus infection causes a pervasive remodelling of the RNA-binding proteome in tick cells
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DOI: 10.1371/journal.ppat.1013393
Abstract: Cellular RNA-binding proteins (RBPs) are pivotal for the viral lifecycle, mediating key host-virus interactions that promote or repress virus infection. While these interactions have been largely studied in the vertebrate host, no comprehensive analyses of… read more here.
Keywords: tick cells; virus infection; binding proteome; uukuniemi virus ... See more keywords
pyRBDome: a comprehensive computational platform for enhancing RNA-binding proteome data
Sign Up to like & getrecommendations! Published in 2024 at "Life Science Alliance"
DOI: 10.26508/lsa.202402787
Abstract: This study explores enhancing protein–RNA interaction prediction using machine learning. High-throughput proteomics approaches have revolutionised the identification of RNA-binding proteins (RBPome) and RNA-binding sequences (RBDome) across organisms. Yet, the extent of noise, including false positives,… read more here.
Keywords: enhancing rna; structural data; binding proteome; machine learning ... See more keywords