MOVICS: an R package for multi-omics integration and visualization in cancer subtyping.
Sign Up to like & getrecommendations! Published in 2020 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btaa1018
Abstract: SUMMARY Stratification of cancer patients into distinct molecular subgroups based on multi-omics data is an important issue in the context of precision medicine. Here we present MOVICS, an R package for multi-omics integration and visualization… read more here.
Keywords: movics package; multi omics; cancer subtyping; package multi ... See more keywords
Deep structure integrative representation of multi-omics data for cancer subtyping
Sign Up to like & getrecommendations! Published in 2022 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btac345
Abstract: MOTIVATION Cancer is a heterogeneous group of diseases. Cancer subtyping is crucial and critical step to diagnosis, prognosis and treatment. Since high-throughput sequencing technologies provide unprecedented opportunity to rapid collect multi-omics data for the same… read more here.
Keywords: multi omics; cancer subtyping; representation; cancer ... See more keywords
A Multiview Clustering Method with Low-Rank and Sparsity Constraints for Cancer Subtyping.
Sign Up to like & getrecommendations! Published in 2021 at "IEEE/ACM transactions on computational biology and bioinformatics"
DOI: 10.1109/tcbb.2021.3122917
Abstract: Multiomics data clustering is one of the major challenges in the field of precision medicine. Integration of multiomics data for cancer subtyping can improve the understanding on cancer and reveal systems-level insights. How to integrate… read more here.
Keywords: multiomics data; multiview clustering; cancer subtyping; low rank ... See more keywords
Uncovering the roles of microRNAs/lncRNAs in characterising breast cancer subtypes and prognosis
Sign Up to like & getrecommendations! Published in 2021 at "BMC Bioinformatics"
DOI: 10.1186/s12859-021-04215-3
Abstract: Background Accurate prognosis and identification of cancer subtypes at molecular level are important steps towards effective and personalised treatments of breast cancer. To this end, many computational methods have been developed to use gene (mRNA)… read more here.
Keywords: cancer subtyping; prognosis; breast cancer; cancer ... See more keywords
SMRT: Randomized Data Transformation for Cancer Subtyping and Big Data Analysis
Sign Up to like & getrecommendations! Published in 2021 at "Frontiers in Oncology"
DOI: 10.3389/fonc.2021.725133
Abstract: Cancer is an umbrella term that includes a range of disorders, from those that are fast-growing and lethal to indolent lesions with low or delayed potential for progression to death. The treatment options, as well… read more here.
Keywords: data analysis; multi omics; cancer subtyping; analysis ... See more keywords