Articles with "chloroplast genome" as a keyword



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Phylogenetic significance of the characteristics of simple sequence repeats at the genus level based on the complete chloroplast genome sequences of Cyatheaceae

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Published in 2021 at "Ecology and Evolution"

DOI: 10.1002/ece3.8151

Abstract: Abstract The simple sequence repeats (SSRs) of plant chloroplasts show considerable genetic variation and have been widely used in species identification and phylogenetic relationship determination. Whether chloroplast genome SSRs can be used to classify Cyatheaceae… read more here.

Keywords: chloroplast; simple sequence; chloroplast genome; genus level ... See more keywords
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The chloroplast genome sequence from Eugenia uniflora, a Myrtaceae from Neotropics

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Published in 2017 at "Plant Systematics and Evolution"

DOI: 10.1007/s00606-017-1431-x

Abstract: Eugenia uniflora is a plant native to tropical America that holds great ecological and economic importance. The complete chloroplast (cp) genome sequence of Eugenia uniflora, a member of the Neotropical Myrtaceae family, is reported here.… read more here.

Keywords: myrtaceae; eugenia uniflora; genome sequence; chloroplast genome ... See more keywords
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Complete chloroplast genome sequence of Xanthium sibiricum provides useful DNA barcodes for future species identification and phylogeny

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Published in 2019 at "Plant Systematics and Evolution"

DOI: 10.1007/s00606-019-01614-1

Abstract: Xanthium sibiricum has been used widely in Chinese medicine for many years. Although of medicinal value, some species in the Xanthium are reported to be toxic and thus correct identification is essential. Whereas previous identification… read more here.

Keywords: sibiricum; complete chloroplast; chloroplast genome; xanthium sibiricum ... See more keywords
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Population structure, genetic diversity and fruit-related traits of wild and cultivated melons based on chloroplast genome

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Published in 2020 at "Genetic Resources and Crop Evolution"

DOI: 10.1007/s10722-020-01041-z

Abstract: The melon is an important fruit crop. Chloroplast genomes are widely used to analyze plant genetic diversity. The chloroplast genome was used to study melon population genetics. We identified 192 SNPs in the chloroplast genome… read more here.

Keywords: melon; fruit; genetic diversity; chloroplast genome ... See more keywords
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Complete chloroplast genome of Campsis grandiflora (Thunb.) schum and systematic and comparative analysis within the family Bignoniaceae.

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Published in 2022 at "Molecular biology reports"

DOI: 10.1007/s11033-022-07139-0

Abstract: BACKGROUND Plants belonging to the Bignoniaceae family have a wide distribution in the tropics and large populations around the world. However, limited information is available about Bignoniaceae. This study aimed to obtain more research information… read more here.

Keywords: chloroplast genome; bignoniaceae; campsis grandiflora; complete chloroplast ... See more keywords
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Chloroplast Genome of Native Silene latifolia subsp. alba from Fennoscandia Shows High Level of Differences from Invasive White Campion

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Published in 2020 at "Plant Molecular Biology Reporter"

DOI: 10.1007/s11105-020-01246-7

Abstract: Silene latifolia is an herbaceous plant with great invasive potential. Spread along trade routes from Europe to almost all continents, white campion became particularly widespread in North America. We sequenced the chloroplast genome of S.… read more here.

Keywords: subsp alba; chloroplast genome; latifolia subsp;
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Analysis and characterization of the Salix suchowensis chloroplast genome

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Published in 2017 at "Journal of Forestry Research"

DOI: 10.1007/s11676-017-0531-3

Abstract: By screening sequence reads from the Salix suchowensis chloroplast (cp) genome that were generated by next-generation sequencing platforms, we assembled a complete circular pseudomolecule for the cp genome. This pseudomolecule is 155,508 bp long and has… read more here.

Keywords: suchowensis chloroplast; salix suchowensis; single copy; chloroplast genome ... See more keywords
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Characteristics analysis of the complete Wurfbainia villosa chloroplast genome

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Published in 2020 at "Physiology and Molecular Biology of Plants"

DOI: 10.1007/s12298-019-00748-3

Abstract: Wurfbainia villosa, which belongs to the huge family Zingiberaceae, is used in the clinic for the treatment of spleen and stomach diseases in southern China. The complete chloroplast genome of W. villosa was sequenced and… read more here.

Keywords: villosa; wurfbainia villosa; villosa chloroplast; chloroplast genome ... See more keywords
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Characterization of the complete chloroplast genome of Emmenopterys henryi (Gentianales: Rubiaceae), an endangered relict tree species endemic to China

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Published in 2017 at "Conservation Genetics Resources"

DOI: 10.1007/s12686-016-0681-1

Abstract: The chloroplast genome sequence of an endangered relict tree species endemic to China, Emmenopterys henryi, was determined based on the Illumina data. The chloroplast genome of E. henryis was sequenced (155,379 in length, GenBank accession… read more here.

Keywords: tree species; chloroplast; relict tree; chloroplast genome ... See more keywords
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Characterization of the complete chloroplast genome sequence of Lepidium meyenii (Brassicaceae)

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Published in 2017 at "Conservation Genetics Resources"

DOI: 10.1007/s12686-017-0695-3

Abstract: Lepidium meyenii (Maca), is an important medical plant, only located in a rather restricted ecological zone in the Andes at a high altitude. Here, the complete chloroplast (cp) genome of L. meyenii (Brassicaceae) was assembled… read more here.

Keywords: lepidium meyenii; meyenii brassicaceae; meyenii; chloroplast ... See more keywords
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Chloroplast genome sequence of the endangered Orchidaceae species Dendrobium hancockii

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Published in 2017 at "Conservation Genetics Resources"

DOI: 10.1007/s12686-017-0788-z

Abstract: Dendrobium hancockii Rolfe is an endangered Orchidaceae species distributed in Southwest China. Here, we reported the complete chloroplast (cp) genome sequence and the cp genomic features of D. hancockii. The genome was 152,159 bp long with… read more here.

Keywords: genome sequence; species dendrobium; endangered orchidaceae; dendrobium hancockii ... See more keywords