Articles with "chromatin structure" as a keyword



Linker histone H1FOO regulates the chromatin structure in mouse zygotes

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Published in 2018 at "FEBS Letters"

DOI: 10.1002/1873-3468.13175

Abstract: The chromatin structure in one‐cell‐stage mouse embryos is extremely loose and becomes tighter at the two‐cell stage. As linker histones are involved in higher‐order chromatin structure, we examined the involvement of the linker histone variant… read more here.

Keywords: chromatin structure; h1foo; structure; cell ... See more keywords

Computational characterization of domain-segregated 3D chromatin structure and segmented DNA methylation status in carcinogenesis.

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Published in 2021 at "Molecular oncology"

DOI: 10.1002/1878-0261.13127

Abstract: The high-order chromatin structure, together with DNA methylation and other epigenetic marks, plays a vital role in gene regulation and displays abnormal status in cancer cells. Theoretical analyses are expected to provide a more unified… read more here.

Keywords: carcinogenesis; chromatin structure; dna methylation;

Chromatin Structure and the Pioneering Transcription Factor FOXA1 Regulate TDG-Mediated Removal of 5-Formylcytosine from DNA.

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Published in 2019 at "Journal of the American Chemical Society"

DOI: 10.1021/jacs.9b07576

Abstract: Although a functional relationship between active DNA demethylation and chromatin structure is often implied, direct experimental evidence is lacking. We investigated the relationship between chromatin structure and thymine DNA glycosylase (TDG) using chemically defined nucleosome… read more here.

Keywords: chromatin structure; dna; tdg; chromatin ... See more keywords

TET2 cascade: a novel regulator of chromatin structure and leukaemogenesis

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Published in 2025 at "Signal Transduction and Targeted Therapy"

DOI: 10.1038/s41392-024-02101-x

Abstract: In the most recently published research article in Nature , 1 it has been demonstrated for the fi rst time that the TET2 regulates the chromatin structure and leukaemogenesis in stem cells and leukaemia cells… read more here.

Keywords: chromatin structure; structure leukaemogenesis; leukaemogenesis; tet2 cascade ... See more keywords

Chromatin conformation regulates the coordination between DNA replication and transcription

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Published in 2018 at "Nature Communications"

DOI: 10.1038/s41467-018-03539-8

Abstract: Chromatin is the template for the basic processes of replication and transcription, making the maintenance of chromosomal integrity critical for cell viability. To elucidate how dividing cells respond to alterations in chromatin structure, here we… read more here.

Keywords: chromatin structure; chromatin; dna replication; replication transcription ... See more keywords

Cold-induced nucleosome dynamics linked to silencing of Arabidopsis FLC

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Published in 2025 at "Nature Communications"

DOI: 10.1038/s41467-025-60735-z

Abstract: Temperature influences nucleosome dynamics, and thus chromatin, to regulate gene expression. Such mechanisms underlie the epigenetic silencing of Arabidopsis FLOWERING LOCUS C (FLC) by prolonged cold. Here, we show a temperature-dependent transition in local chromatin… read more here.

Keywords: induced nucleosome; silencing arabidopsis; chromatin structure; cold induced ... See more keywords

KLF4 inhibits early neural differentiation of ESCs by coordinating specific 3D chromatin structure

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Published in 2022 at "Nucleic Acids Research"

DOI: 10.1093/nar/gkac1118

Abstract: Abstract Neural differentiation of embryonic stem cells (ESCs) requires precisely orchestrated gene regulation, a process governed in part by changes in 3D chromatin structure. How these changes regulate gene expression in this context remains unclear.… read more here.

Keywords: klf4 inhibits; neural differentiation; differentiation; chromatin structure ... See more keywords

Chromosome-scale assembly of the streamlined picoeukaryote Picochlorum sp. SENEW3 genome reveals Rabl-like chromatin structure and potential for C4 photosynthesis

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Published in 2024 at "Microbial Genomics"

DOI: 10.1099/mgen.0.001223

Abstract: Abstract Genome sequencing and assembly of the photosynthetic picoeukaryotic Picochlorum sp. SENEW3 revealed a compact genome with a reduced gene set, few repetitive sequences, and an organized Rabl-like chromatin structure. Hi-C chromosome conformation capture revealed… read more here.

Keywords: like chromatin; picochlorum senew3; rabl like; chromatin structure ... See more keywords

Diagnostics of DNA fragmentation in human spermatozoa: Are sperm chromatin structure analysis and sperm chromatin dispersion tests (SCD‐HaloSpermG2®) comparable?

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Published in 2019 at "Andrologia"

DOI: 10.1111/and.13316

Abstract: Men affected with idiopathic infertility often display basic spermiogramme values similar to fertile individuals, questioning the diagnostic impact of the World Health Organization (WHO) thresholds used. This study explored sperm DNA fragmentation in single ejaculates… read more here.

Keywords: chromatin; chromatin structure; sperm chromatin; dna fragmentation ... See more keywords

Resveratrol benefits on sperm DNA, chromatin structure and reproductive outcomes of varicocelized rats

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Published in 2022 at "Andrologia"

DOI: 10.1111/and.14417

Abstract: In varicocele, the main cause of sperm DNA damage is oxidative stress (OS). Resveratrol, a polyphenol with antioxidant properties, can protect cells from injuries caused by OS. We investigated the benefits of resveratrol against reproductive… read more here.

Keywords: dna; resveratrol; sperm dna; varicocele ... See more keywords

Chromatin structure related to oncogenesis.

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Published in 2023 at "Cancer science"

DOI: 10.1111/cas.15850

Abstract: Chromatin is the fundamental structure of genomic DNA in eukaryotic cells. The nucleosome, the primary unit of chromatin, consists of DNA and histone proteins, and is important for the maintenance of genomic DNA. Histone mutations… read more here.

Keywords: structure; histone; related oncogenesis; chromatin ... See more keywords