Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data
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DOI: 10.1038/s41477-019-0487-8
Abstract: Construction of chromosome-level assembly is a vital step in achieving the goal of a ‘Platinum’ genome, but it remains a major challenge to assemble and anchor sequences to chromosomes in autopolyploid or highly heterozygous genomes.… read more here.
Keywords: aware chromosomal; chromosomal scale; autopolyploid genomes; allele aware ... See more keywords
The chromosomal-scale genome sequencing and assembly of Athetis lepigone
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DOI: 10.1038/s41597-024-03136-z
Abstract: Athetis lepigone is an emerging highly polyphagous insect pest reported to cause crop damage in several European and Asian countries. However, our understanding of its genetic adaptation mechanisms has been limited due to lack of… read more here.
Keywords: athetis lepigone; genome; chromosomal scale; lepigone ... See more keywords
A chromosomal-scale reference genome for Rosa hugonis
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DOI: 10.1038/s41597-025-04526-7
Abstract: Rosa hugonis is widely distributed in the Hengduan Mountains, Qinling Mountains, and northern China. It is an important candidate species for ecological restoration, given its good adaptability. Here, we present the first high-quality chromosome-level assembly… read more here.
Keywords: scale reference; rosa; genome; chromosomal scale ... See more keywords
A genetic risk score using human chromosomal-scale length variation can predict schizophrenia
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DOI: 10.1038/s41598-021-97983-0
Abstract: Studies indicate that schizophrenia has a genetic component, however it cannot be isolated to a single gene. We aimed to determine how well one could predict that a person will develop schizophrenia based on their… read more here.
Keywords: schizophrenia; scale length; risk score; chromosomal scale ... See more keywords
Chromosomal-Scale Genome Assemblies of Two Coastal Plant Species, Scaevola taccada and S. hainanensis—Insight into Adaptation Outside of the Common Range
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DOI: 10.3390/ijms24087355
Abstract: While most of the species in Goodeniaceae family, excluding the Scaevola genus, are endemic to Australasia, S. taccada and S. hainanensis have expanded their distribution range to the tropical coastlines of the Atlantic and Indian… read more here.
Keywords: chromosomal scale; outside common; adaptation; taccada hainanensis ... See more keywords