Circular at the very beginning: on the initial genomes in the RNA world
Sign Up to like & getrecommendations! Published in 2024 at "RNA Biology"
DOI: 10.1080/15476286.2024.2380130
Abstract: ABSTRACT It is likely that an RNA world existed in early life, when RNA played both the roles of the genome and functional molecules, thereby undergoing Darwinian evolution. However, even with only one type of… read more here.
Keywords: circular beginning; rna world; world; circular genome ... See more keywords
AuraGenome: An LLM-Powered Framework for On-the-Fly Reusable and Scalable Circular Genome Visualizations
Sign Up to like & getrecommendations! Published in 2025 at "IEEE Computer Graphics and Applications"
DOI: 10.1109/mcg.2025.3581560
Abstract: Circular genome visualizations are essential for exploring structural variants and gene regulation. However, existing tools often require complex scripting and manual configuration, making the process time-consuming, error-prone, and difficult to learn. To address these challenges,… read more here.
Keywords: reusable scalable; llm powered; powered framework; circular genome ... See more keywords
GenoVi, an open-source automated circular genome visualizer for bacteria and archaea
Sign Up to like & getrecommendations! Published in 2023 at "PLOS Computational Biology"
DOI: 10.1371/journal.pcbi.1010998
Abstract: The increase in microbial sequenced genomes from pure cultures and metagenomic samples reflects the current attainability of whole-genome and shotgun sequencing methods. However, software for genome visualization still lacks automation, integration of different analyses, and… read more here.
Keywords: circular genome; customizable options; bacteria archaea; sequence elements ... See more keywords