Impact of tree priors in species delimitation and phylogenetics of the genus Oligoryzomys (Rodentia: Cricetidae).
Sign Up to like & getrecommendations! Published in 2018 at "Molecular phylogenetics and evolution"
DOI: 10.1016/j.ympev.2017.10.021
Abstract: The use of genetic data and tree-based algorithms to delimit evolutionary lineages is becoming an important practice in taxonomic identification, especially in morphologically cryptic groups. The effects of different phylogenetic and/or coalescent models in the… read more here.
Keywords: impact; yule; species delimitation; genus oligoryzomys ... See more keywords
Gas–Liquid Contactors’ Aeration Capacities When Agitated by Rushton Turbines of Various Diameters
Sign Up to like & getrecommendations! Published in 2020 at "ACS Omega"
DOI: 10.1021/acsomega.9b04005
Abstract: Mass transfer processes are one of the most important operations in chemical, biochemical, and food industries worldwide. In the processes that are controlled by the gas–liquid mass transfer rate, the volumetric mass transfer coefficient kLa… read more here.
Keywords: impeller; non coalescent; gas liquid; gas ... See more keywords
Fractional coalescent
Sign Up to like & getrecommendations! Published in 2019 at "Proceedings of the National Academy of Sciences of the United States of America"
DOI: 10.1073/pnas.1810239116
Abstract: Significance The fractional coalescent is a generalization of Kingman’s n-coalescent. It facilitates the development of the theory of population genetic processes that deviate from Poisson-distributed waiting times. It also marks the use of methods developed… read more here.
Keywords: coalescent; fractional coalescent; number offspring; time ... See more keywords
Imputation of missing genotypes within LD-blocks relying on the basic coalescent and beyond: consideration of population growth and structure
Sign Up to like & getrecommendations! Published in 2017 at "BMC Genomics"
DOI: 10.1186/s12864-017-4208-2
Abstract: BackgroundGenotypes not directly measured in genetic studies are often imputed to improve statistical power and to increase mapping resolution. The accuracy of standard imputation techniques strongly depends on the similarity of linkage disequilibrium (LD) patterns… read more here.
Keywords: growth structure; imputation; population growth; basic coalescent ... See more keywords
Hamiltonian Monte Carlo sampling to estimate past population dynamics using the skygrid coalescent model in a Bayesian phylogenetics framework
Sign Up to like & getrecommendations! Published in 2020 at "Wellcome Open Research"
DOI: 10.12688/wellcomeopenres.15770.1
Abstract: Nonparametric coalescent-based models are often employed to infer past population dynamics over time. Several of these models, such as the skyride and skygrid models, are equipped with a block-updating Markov chain Monte Carlo sampling scheme… read more here.
Keywords: population dynamics; model; monte carlo; coalescent ... See more keywords
Bayesian Estimation of Population Size Changes by Sampling Tajima's Trees.
Sign Up to like & getrecommendations! Published in 2019 at "Genetics"
DOI: 10.1534/genetics.119.302373
Abstract: The large state space of gene genealogies is a major hurdle for inference methods based on Kingman's coalescent. Here, we present a new Bayesian approach for inferring past population sizes, which relies on a lower-resolution… read more here.
Keywords: coalescent; estimation population; population size; bayesian estimation ... See more keywords
Correspondence Between Genomic- and Genealogical/Coalescent-Based Inference of Homozygosity by Descent in Large French-Canadian Genealogies
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Genetics"
DOI: 10.3389/fgene.2021.808829
Abstract: Research on the genetics of complex traits overwhelmingly focuses on the additive effects of genes. Yet, animal studies have shown that non-additive effects, in particular homozygosity effects, can shape complex traits. Recent investigations in human… read more here.
Keywords: time; genealogical coalescent; genealogical data; hbd ... See more keywords