Computational Methods for Mapping, Assembly and Quantification for Coding and Non-coding Transcripts
Sign Up to like & getrecommendations! Published in 2019 at "Computational and Structural Biotechnology Journal"
DOI: 10.1016/j.csbj.2019.04.012
Abstract: The measurement of gene expression has long provided significant insight into biological functions. The development of high-throughput short-read sequencing technology has revealed transcriptional complexity at an unprecedented scale, and informed almost all areas of biology.… read more here.
Keywords: non coding; methods mapping; computational methods; assembly quantification ... See more keywords
The coding and non-coding transcriptional landscape of subependymal giant cell astrocytomas
Sign Up to like & getrecommendations! Published in 2019 at "Brain"
DOI: 10.1093/brain/awz370
Abstract: Subependymal giant cell astrocytomas (SEGAs) cause serious neurological complications in patients with tuberous sclerosis complex. Using high-throughput sequencing, Bongaarts et al. identify MAPK/ERK activation in SEGAs, potentially via the "Ragulator complex", and propose that the… read more here.
Keywords: cell astrocytomas; giant cell; coding non; subependymal giant ... See more keywords
Genetic Subdivisions of Follicular Lymphoma Defined by Distinct Coding and non-coding Mutation Patterns.
Sign Up to like & getrecommendations! Published in 2023 at "Blood"
DOI: 10.1182/blood.2022018719
Abstract: Follicular lymphoma (FL) accounts for approximately 20% of all new lymphoma cases. Increases in cytological grade are a feature of the clinical progression of this malignancy, and eventual histologic transformation (HT) to the aggressive diffuse… read more here.
Keywords: coding mutation; lymphoma; follicular lymphoma; coding non ... See more keywords
Developmental Programming: Prenatal Testosterone Excess on Liver and Muscle Coding and Non-Coding RNA in Female Sheep.
Sign Up to like & getrecommendations! Published in 2021 at "Endocrinology"
DOI: 10.1210/endocr/bqab225
Abstract: Prenatal testosterone (T)-treated female sheep manifest peripheral insulin resistance, ectopic lipid accumulation and insulin signaling disruption in liver and muscle. This study investigated transcriptional changes and transcriptome signature of prenatal T excess-induced hepatic and muscle-specific… read more here.
Keywords: muscle; liver muscle; female sheep; prenatal testosterone ... See more keywords
Characterization the coding and non-coding RNA components in the transcriptome of invasion weed Alternanthera philoxeroides
Sign Up to like & getrecommendations! Published in 2021 at "Notulae Botanicae Horti Agrobotanici Cluj-napoca"
DOI: 10.15835/nbha49112242
Abstract: Alternanthera philoxeroides is a notorious invasive weed worldwide, but it still lacks a genome information currently. In this study, we collected 4 groups of A. philoxeroides Illumina RNA-seq data (62.5 Gb) and performed a comprehensive… read more here.
Keywords: rna components; coding non; alternanthera philoxeroides; characterization coding ... See more keywords
Multiplexed target enrichment of coding and non-coding transcriptomes enables studying Candida spp. infections from human derived samples
Sign Up to like & getrecommendations! Published in 2023 at "Frontiers in Cellular and Infection Microbiology"
DOI: 10.3389/fcimb.2023.1093178
Abstract: The study of transcriptomic interactions between host and pathogens in in vivo conditions is challenged by the low relative amounts of the pathogen RNA. Yeast opportunistic pathogens of the genus Candida can cause life-threatening systemic… read more here.
Keywords: coding transcriptomes; non coding; enrichment; coding non ... See more keywords
Transcriptome Analysis of Subcutaneous Adipose Tissue from Severely Obese Patients Highlights Deregulation Profiles in Coding and Non-Coding Oncogenes
Sign Up to like & getrecommendations! Published in 2021 at "International Journal of Molecular Sciences"
DOI: 10.3390/ijms22041989
Abstract: Obesity is a major risk factor for a large number of secondary diseases, including cancer. Specific insights into the role of gender differences and secondary comorbidities, such as type 2 diabetes (T2D) and cancer risk,… read more here.
Keywords: obese patients; non coding; adipose tissue; subcutaneous adipose ... See more keywords
Evaluation of Exosomal Coding and Non-Coding RNA Signature in Obese Adolescents
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DOI: 10.3390/ijms24010139
Abstract: Exosomes may contribute to the pathogenesis of obesity through their action as communication mediators. As we have previously demonstrated, in obese adolescents, some circulating miRNAs modified the C-type natriuretic peptide (CNP) expression and were associated… read more here.
Keywords: obese adolescents; non coding; mir; coding non ... See more keywords