Articles with "comparative modeling" as a keyword



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Segmentation and Comparative Modeling in an 8.6-Å Cryo-EM Map of the Singapore Grouper Iridovirus.

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Published in 2019 at "Structure"

DOI: 10.1016/j.str.2019.08.002

Abstract: SGIV, or Singapore grouper iridovirus, is a large double-stranded DNA virus, reaching a diameter of 220 nm and packaging a genome of 140 kb. We present a 3D cryoelectron microscopy (cryo-EM) icosahedral reconstruction of SGIV determined… read more here.

Keywords: comparative modeling; singapore grouper; segmentation; cryo map ... See more keywords
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Integrating comparative modeling and accelerated simulations reveals conformational and energetic basis of actomyosin force generation

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Published in 2023 at "Proceedings of the National Academy of Sciences of the United States of America"

DOI: 10.1073/pnas.2215836120

Abstract: Significance Interactions between myosin and actin are essential in producing various cellular forces. Targeting cardiac myosin, several small molecules have been developed to treat cardiomyopathy. A clear mechanistic picture of the allosteric control in the… read more here.

Keywords: modeling accelerated; comparative modeling; actomyosin; integrating comparative ... See more keywords
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Comparative Modeling of Frequency Mixing Measurements of Magnetic Nanoparticles Using Micromagnetic Simulations and Langevin Theory

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Published in 2021 at "Nanomaterials"

DOI: 10.3390/nano11051257

Abstract: Dual frequency magnetic excitation of magnetic nanoparticles (MNP) enables enhanced biosensing applications. This was studied from an experimental and theoretical perspective: nonlinear sum-frequency components of MNP exposed to dual-frequency magnetic excitation were measured as a… read more here.

Keywords: micromagnetic simulations; comparative modeling; langevin theory; frequency ... See more keywords