Evolutionary adaptation of bovine coronavirus (BCoV): Screening of natural recombinations across the complete genomes
Sign Up to like & getrecommendations! Published in 2022 at "Journal of Basic Microbiology"
DOI: 10.1002/jobm.202200548
Abstract: Bovine coronavirus (BCoV) is a member of pathogenic Betacoronaviruses that has been circulating for several decades in multiple host species. Given the similarity between BCoV and human coronaviruses, the current study aimed to review the… read more here.
Keywords: complete genomes; coronavirus bcov; bcov; bovine coronavirus ... See more keywords
Accurate and complete genomes from metagenomes.
Sign Up to like & getrecommendations! Published in 2020 at "Genome research"
DOI: 10.1101/gr.258640.119
Abstract: Genomes are an integral component of the biological information about an organism; thus, the more complete the genome, the more informative it is. Historically, bacterial and archaeal genomes were reconstructed from pure (monoclonal) cultures, and… read more here.
Keywords: genomes metagenomes; accurate complete; complete genomes;
Using Nanopore Sequencing to Obtain Complete Bacterial Genomes from Saliva Samples
Sign Up to like & getrecommendations! Published in 2022 at "mSystems"
DOI: 10.1128/msystems.00491-22
Abstract: Obtaining complete and accurate genomes is crucial to the study of any organism. Previously, obtaining complete genomes of bacteria, including those of the human microbiome, frequently required isolation of the organism, as well as low-throughput,… read more here.
Keywords: obtaining complete; complete genomes; obtain complete; bacterial genomes ... See more keywords
Retrieving Good-Quality Salmonella Genomes From the GenBank Database Using a Python Tool, SalmoDEST
Sign Up to like & getrecommendations! Published in 2022 at "Bioinformatics and Biology Insights"
DOI: 10.1177/11779322221080264
Abstract: With the advent of next-generation whole-genome sequencing (WGS), the need for good-quality and well-characterised Salmonella genomes has increased over the past years. Good-quality complete genomes are often required for assembly reference mapping or phylogenetic single… read more here.
Keywords: tool; quality; complete genomes; salmonella genomes ... See more keywords
QitanTech Nanopore Long-Read Sequencing Enables Rapid Resolution of Complete Genomes of Multi-Drug Resistant Pathogens
Sign Up to like & getrecommendations! Published in 2022 at "Frontiers in Microbiology"
DOI: 10.3389/fmicb.2022.778659
Abstract: Advancement of novel sequencing technologies facilitates modern life science and medicine unprecedentedly. Exploring complete genome sequences of bacteria by long-read sequencing technology is significant for microbial genomics research. However, third-generation long-read sequencing technologies are available… read more here.
Keywords: nanopore long; sequencing technology; complete genomes; qitantech nanopore ... See more keywords
Complete Genomes of Theileria orientalis Chitose and Buffeli Genotypes Reveal within Species Translocations and Differences in ABC Transporter Content
Sign Up to like & getrecommendations! Published in 2022 at "Pathogens"
DOI: 10.3390/pathogens11070801
Abstract: Theileria orientalis causes losses to cattle producers in Eastern Asia, Oceania and, more recently, North America. One pathogenic genotype (Ikeda) has been sequenced to the chromosomal level, while only draft genomes exist for globally distributed… read more here.
Keywords: theileria orientalis; complete genomes; buffeli genotypes; abc transporter ... See more keywords