Centrifuger: lossless compression of microbial genomes for efficient and accurate metagenomic sequence classification
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DOI: 10.1186/s13059-024-03244-4
Abstract: Centrifuger is an efficient taxonomic classification method that compares sequencing reads against a microbial genome database. In Centrifuger, the Burrows-Wheeler transformed genome sequences are losslessly compressed using a novel scheme called run-block compression. Run-block compression… read more here.
Keywords: classification; compression microbial; lossless compression; centrifuger ... See more keywords