Computational pan-genome mapping and pairwise SNP-distance improve detection of Mycobacterium tuberculosis transmission clusters
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DOI: 10.1371/journal.pcbi.1007527
Abstract: Next-generation sequencing based base-by-base distance measures have become an integral complement to epidemiological investigation of infectious disease outbreaks. This study introduces PANPASCO, a computational pan-genome mapping based, pairwise distance method that is highly sensitive to… read more here.
Keywords: distance; pan genome; genome mapping; computational pan ... See more keywords