Articles with "computational phenotyping" as a keyword



Genomic characterization and computational phenotyping of nitrogen-fixing bacteria isolated from Colombian sugarcane fields

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Published in 2021 at "Scientific Reports"

DOI: 10.1038/s41598-021-88380-8

Abstract: Previous studies have shown the sugarcane microbiome harbors diverse plant growth promoting microorganisms, including nitrogen-fixing bacteria (diazotrophs), which can serve as biofertilizers. The genomes of 22 diazotrophs from Colombian sugarcane fields were sequenced to investigate… read more here.

Keywords: fixing bacteria; nitrogen fixing; computational phenotyping; sugarcane ... See more keywords
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FedPAR: Federated PARAFAC2 tensor factorization for computational phenotyping

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Published in 2024 at "IISE Transactions on Healthcare Systems Engineering"

DOI: 10.1080/24725579.2024.2333261

Abstract: Abstract Modeling temporally irregular electronic health records (EHRs) through computational phenotyping that transforms massive EHR data into clinically meaningful medical concepts has become critical in the healthcare industry. PARAFAC2 tensor factorization has demonstrated effectiveness in… read more here.

Keywords: parafac2; factorization; tensor factorization; parafac2 tensor ... See more keywords
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Impact of Diverse Data Sources on Computational Phenotyping

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Published in 2020 at "Frontiers in Genetics"

DOI: 10.3389/fgene.2020.00556

Abstract: Electronic health records (EHRs) are widely adopted with a great potential to serve as a rich, integrated source of phenotype information. Computational phenotyping, which extracts phenotypes from EHR data automatically, can accelerate the adoption and… read more here.

Keywords: data sources; diverse data; phenotyping; computational phenotyping ... See more keywords