openPR - A computational tool for CT conversion assessment with proton radiography.
Sign Up to like & getrecommendations! Published in 2020 at "Medical physics"
DOI: 10.1002/mp.14571
Abstract: PURPOSE One of the main sources of uncertainty in proton therapy is the conversion of the Hounsfield Units of the planning CT to (relative) proton stopping powers. Proton radiography provides range error maps but these… read more here.
Keywords: proton radiography; uncertainty; computational tool; conversion ... See more keywords
EGGTART: A computational tool to visualize the dynamics of biophysical transport processes under the inhomogeneous l-TASEP.
Sign Up to like & getrecommendations! Published in 2021 at "Biophysical journal"
DOI: 10.1016/j.bpj.2021.02.004
Abstract: The totally asymmetric simple exclusion process (TASEP), which describes the stochastic dynamics of interacting particles on a lattice, has been actively studied over the past several decades and applied to model important biological transport processes.… read more here.
Keywords: transport; tool visualize; computational tool; transport processes ... See more keywords
Maastricht antiarrhythmic drug evaluator (MANTA): a computational tool for better understanding of antiarrhythmic drugs.
Sign Up to like & getrecommendations! Published in 2019 at "Pharmacological research"
DOI: 10.1016/j.phrs.2019.104444
Abstract: Cardiac arrhythmias are a global health burden, contributing significantly to morbidity and mortality worldwide. Despite technological advances in catheter ablation therapy, antiarrhythmic drugs (AADs) remain a cornerstone for the management of cardiac arrhythmias. Experimental and… read more here.
Keywords: class; tool; drug; better understanding ... See more keywords
Capybara: A computational tool to measure cell identity and fate transitions.
Sign Up to like & getrecommendations! Published in 2022 at "Cell stem cell"
DOI: 10.1016/j.stem.2022.03.001
Abstract: Measuring cell identity in development, disease, and reprogramming is challenging as cell types and states are in continual transition. Here, we present Capybara, a computational tool to classify discrete cell identity and intermediate "hybrid" cell… read more here.
Keywords: cell identity; fate; capybara computational; cell ... See more keywords
gene2drug: a computational tool for pathway-based rational drug repositioning
Sign Up to like & getrecommendations! Published in 2018 at "Bioinformatics"
DOI: 10.1093/bioinformatics/btx800
Abstract: Motivation Drug repositioning has been proposed as an effective shortcut to drug discovery. The availability of large collections of transcriptional responses to drugs enables computational approaches to drug repositioning directly based on measured molecular effects.… read more here.
Keywords: drug repositioning; drug; gene2drug computational; computational tool ... See more keywords
A Computational Tool for Comparative Energy Cost Analysis of Multiple-Crop Production Systems
Sign Up to like & getrecommendations! Published in 2017 at "Energies"
DOI: 10.3390/en10070831
Abstract: Various crops can be considered as potential bioenergy and biofuel production feedstocks. The selection of the crops to be cultivated for that purpose is based on several factors. For an objective comparison between different crops,… read more here.
Keywords: energy cost; multiple crop; production; energy ... See more keywords